Basic Information
Locus ID:
gene-QYE76_047368
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter transmembrane region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 318035199 | 318039487 | - | gene-QYE76_047368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 105,978.29 Da | 38.89 | 73.46 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 49 | 87 | 1.4E-5 | IPR029472 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 114 | 248 | 2.8E-19 | - |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 603 | 845 | 9.0E-67 | IPR013103 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 603 | 964 | 7.34E-29 | IPR043502 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 276 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051201939.1 | uncharacterized protein LOC127315493 [Lolium perenne] | 0 |
| Q9ZT94 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1 | 0 | |
| TrEMBL | Q94LQ7 | Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g40800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |