Basic Information
Locus ID:
gene-QYE76_046974
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 307730459 | 307741834 | + | gene-QYE76_046974 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 106,779.46 Da | 47.87 | 77.43 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 670 | 760 | 4.32512E-10 | - |
| Pfam | PF12937 | F-box-like | 2 | 36 | 4.8E-6 | IPR001810 |
| Pfam | PF07734 | F-box associated | 206 | 340 | 1.6E-7 | IPR006527 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 827 | 912 | 1.1E-7 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 802 | 920 | 1.78E-17 | IPR043502 |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 36 | 5.76E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 39 | 2.0E-7 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 793 | 855 | 7.4E-10 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 664 | 776 | 3.8E-9 | IPR021109 |
| SMART | SM00256 | fbox_2 | 3 | 44 | 4.0E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 97 | 333 | 3.4E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 44 | 11.034144 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 583 | - | - |
| Coils | Coil | Coil | 513 | 533 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10190.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_051212838.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| O82622 | Putative F-box protein At4g10190 OS=Arabidopsis thaliana OX=3702 GN=At4g10190 PE=4 SV=2 | 0 | |
| TrEMBL | M8C5H1 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 10 | gene-QYE76_011631, gene-QYE76_011773, gene-QYE76_014559 ... |