Basic Information
Locus ID:
gene-QYE76_046888
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 305314496 | 305314777 | - | gene-QYE76_046888 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 10,284.66 Da | 57.57 | 82.69 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 16 | 60 | 1.13164E-22 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 18 | 58 | 1.5E-4 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 11 | 71 | 4.48E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 91 | 4.6E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 18 | 58 | 0.0076 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 18 | 59 | 9.612443 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 33 | 42 | - | IPR017907 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23780.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051184889.1 | uncharacterized protein LOC127299049 [Lolium perenne] | 0 |
| Q6R567 | E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JFD1 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology