halophFGD

Basic Information

Locus ID: gene-QYE76_046883

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Ribonuclease H protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	305211268	305216121	+	gene-QYE76_046883

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.17	111,916.80 Da	68.71	61.16	-0.71

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF57756	Retrovirus zinc finger-like domains	451	491	2.3E-5	IPR036875
Gene3D	G3DSA:4.10.60.10	-	438	497	2.6E-6	-
ProSiteProfiles	PS50158	Zinc finger CCHC-type profile.	455	469	9.108787	IPR001878
MobiDBLite	mobidb-lite	consensus disorder prediction	840	856	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	325	407	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	775	793	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	696	810	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	895	911	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	228	278	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	839	865	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	895	930	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	291	314	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	150	177	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	723	771	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	291	439	-	-

Gene Ontology

Molecular Function:

KEGG Pathway

KO Term:

K08081 (tropinone reductase I [EC:1.1.1.206])

Pathway:

ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R02832 (Tropine + NADP+ <=> Tropinone + NADPH + H+)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051229442.1	uncharacterized protein LOC127347274 [Lolium perenne]	0
TrEMBL	A0A804R877	CCHC-type domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	11	gene-QYE76_006358, gene-QYE76_016631, gene-QYE76_025777 ... gene-QYE76_031336, gene-QYE76_039313, gene-QYE76_044933, gene-QYE76_046883, gene-QYE76_053384, gene-QYE76_057408, gene-QYE76_064114, gene-QYE76_070294