Basic Information
Locus ID:
gene-QYE76_046833
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 303546666 | 303561750 | - | gene-QYE76_046833 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 134,988.33 Da | 47.26 | 66.41 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 622 | 715 | 2.8E-11 | IPR005162 |
| Pfam | PF03732 | Retrotransposon gag protein | 1007 | 1100 | 8.6E-11 | IPR005162 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 874 | 893 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1159 | 1183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 328 | - | - |
| Coils | Coil | Coil | 309 | 329 | - | - |
| Coils | Coil | Coil | 776 | 796 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044370740.1 | uncharacterized protein LOC123092945 isoform X4 [Triticum aestivum] | 0 |
| TrEMBL | A0A2T2PTT2 | Retrotrans_gag domain-containing protein OS=Bradyrhizobium sp. MOS002 OX=2133947 GN=C7G41_36765 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 272 | gene-QYE76_000070, gene-QYE76_000854, gene-QYE76_001188 ... |