halophFGD

Basic Information

Locus ID: gene-QYE76_046617

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: transposition, RNA-mediated

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	297318807	297322175	-	gene-QYE76_046617

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.55	117,270.29 Da	60.17	65.58	-0.70

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03732	Retrotransposon gag protein	553	625	1.3E-9	IPR005162
MobiDBLite	mobidb-lite	consensus disorder prediction	784	817	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	784	807	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	273	288	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	295	321	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	223	242	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	670	741	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	222	242	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	670	700	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	267	321	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	109	146	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	701	734	-	-
Coils	Coil	Coil	225	256	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_051197464.1	uncharacterized protein LOC127310874 [Lolium perenne]	0
TrEMBL	Q2QTZ1	Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g18060 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	82	gene-QYE76_000928, gene-QYE76_001711, gene-QYE76_003439 ... gene-QYE76_003570, gene-QYE76_006057, gene-QYE76_007340, gene-QYE76_008138, gene-QYE76_008140, gene-QYE76_008324, gene-QYE76_008826, gene-QYE76_009632, gene-QYE76_009946, gene-QYE76_010020, gene-QYE76_010660, gene-QYE76_011332, gene-QYE76_013429, gene-QYE76_013760, gene-QYE76_013994, gene-QYE76_015018, gene-QYE76_015330, gene-QYE76_015596, gene-QYE76_015834, gene-QYE76_019881, gene-QYE76_022649, gene-QYE76_023319, gene-QYE76_023589, gene-QYE76_023617, gene-QYE76_026130, gene-QYE76_029103, gene-QYE76_029619, gene-QYE76_029826, gene-QYE76_030276, gene-QYE76_030377, gene-QYE76_031129, gene-QYE76_031881, gene-QYE76_032116, gene-QYE76_032279, gene-QYE76_032397, gene-QYE76_034124, gene-QYE76_035420, gene-QYE76_035674, gene-QYE76_039214, gene-QYE76_040595, gene-QYE76_041606, gene-QYE76_042171, gene-QYE76_042411, gene-QYE76_042631, gene-QYE76_044141, gene-QYE76_044684, gene-QYE76_044800, gene-QYE76_045754, gene-QYE76_046617, gene-QYE76_046727, gene-QYE76_046776, gene-QYE76_046784, gene-QYE76_050595, gene-QYE76_050653, gene-QYE76_051404, gene-QYE76_051447, gene-QYE76_052811, gene-QYE76_052862, gene-QYE76_054113, gene-QYE76_054126, gene-QYE76_055254, gene-QYE76_056358, gene-QYE76_056631, gene-QYE76_059606, gene-QYE76_060562, gene-QYE76_060860, gene-QYE76_061592, gene-QYE76_062038, gene-QYE76_062198, gene-QYE76_063908, gene-QYE76_066708, gene-QYE76_066791, gene-QYE76_066914, gene-QYE76_067235, gene-QYE76_067303, gene-QYE76_067573, gene-QYE76_069896, gene-QYE76_070728, gene-QYE76_071938