halophFGD

Basic Information

Locus ID: gene-QYE76_046144

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: FBD

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	284184606	284189333	-	gene-QYE76_046144

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.01	65,938.27 Da	43.38	107.08	0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd09272	RNase_HI_RT_Ty1	1	80	8.31284E-30	-
Pfam	PF00646	F-box domain	92	133	1.0E-6	IPR001810
Pfam	PF00646	F-box domain	140	184	9.3E-9	IPR001810
Pfam	PF08387	FBD	461	504	4.6E-8	IPR006566
SUPERFAMILY	SSF81383	F-box domain	138	180	3.27E-12	IPR036047
SUPERFAMILY	SSF52047	RNI-like	227	455	6.91E-9	-
SUPERFAMILY	SSF81383	F-box domain	85	132	6.02E-10	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	85	131	6.1E-7	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	221	553	6.4E-9	IPR032675
Gene3D	G3DSA:1.20.1280.50	-	140	181	9.0E-8	-
SMART	SM00256	fbox_2	144	184	2.9E-5	IPR001810
SMART	SM00256	fbox_2	95	134	0.003	IPR001810
ProSiteProfiles	PS50181	F-box domain profile.	89	144	9.974368	IPR001810
ProSiteProfiles	PS50181	F-box domain profile.	138	174	10.080346	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G02910.2	F-box/RNI-like superfamily protein.
RefSeq	XP_051212896.1	uncharacterized protein LOC127330855 [Lolium perenne]
Swiss-Prot	P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
TrEMBL	A0A8R7QF23	FBD domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	1	BH01.4812
Poaceae	Lolium multiflorum	153	gene-QYE76_000668, gene-QYE76_000671, gene-QYE76_000959 ... gene-QYE76_001525, gene-QYE76_002224, gene-QYE76_002426, gene-QYE76_002595, gene-QYE76_003330, gene-QYE76_003959, gene-QYE76_003998, gene-QYE76_004343, gene-QYE76_004570, gene-QYE76_006866, gene-QYE76_007133, gene-QYE76_007553, gene-QYE76_007927, gene-QYE76_008040, gene-QYE76_008226, gene-QYE76_008288, gene-QYE76_009037, gene-QYE76_009523, gene-QYE76_009983, gene-QYE76_009991, gene-QYE76_009992, gene-QYE76_010004, gene-QYE76_010426, gene-QYE76_010595, gene-QYE76_010716, gene-QYE76_010984, gene-QYE76_011262, gene-QYE76_011567, gene-QYE76_012374, gene-QYE76_012438, gene-QYE76_012689, gene-QYE76_013702, gene-QYE76_013729, gene-QYE76_014231, gene-QYE76_015789, gene-QYE76_015853, gene-QYE76_016485, gene-QYE76_016527, gene-QYE76_016608, gene-QYE76_017067, gene-QYE76_017587, gene-QYE76_017794, gene-QYE76_018023, gene-QYE76_018206, gene-QYE76_018230, gene-QYE76_018388, gene-QYE76_018886, gene-QYE76_018993, gene-QYE76_019653, gene-QYE76_020334, gene-QYE76_020388, gene-QYE76_020824, gene-QYE76_021905, gene-QYE76_022796, gene-QYE76_022973, gene-QYE76_024617, gene-QYE76_025223, gene-QYE76_025524, gene-QYE76_027048, gene-QYE76_029496, gene-QYE76_029756, gene-QYE76_029913, gene-QYE76_029992, gene-QYE76_030389, gene-QYE76_030562, gene-QYE76_030715, gene-QYE76_030880, gene-QYE76_030970, gene-QYE76_032383, gene-QYE76_032642, gene-QYE76_033950, gene-QYE76_034698, gene-QYE76_034917, gene-QYE76_037162, gene-QYE76_037186, gene-QYE76_037361, gene-QYE76_037426, gene-QYE76_037457, gene-QYE76_037550, gene-QYE76_037555, gene-QYE76_037564, gene-QYE76_037700, gene-QYE76_037721, gene-QYE76_040870, gene-QYE76_040959, gene-QYE76_041108, gene-QYE76_041236, gene-QYE76_041350, gene-QYE76_042003, gene-QYE76_042048, gene-QYE76_042307, gene-QYE76_042452, gene-QYE76_042776, gene-QYE76_042891, gene-QYE76_043908, gene-QYE76_044033, gene-QYE76_044270, gene-QYE76_046144, gene-QYE76_046898, gene-QYE76_047010, gene-QYE76_047203, gene-QYE76_047959, gene-QYE76_048709, gene-QYE76_048743, gene-QYE76_050574, gene-QYE76_050945, gene-QYE76_051049, gene-QYE76_051987, gene-QYE76_052147, gene-QYE76_052500, gene-QYE76_052599, gene-QYE76_052674, gene-QYE76_053061, gene-QYE76_053445, gene-QYE76_053448, gene-QYE76_053787, gene-QYE76_053859, gene-QYE76_054116, gene-QYE76_055171, gene-QYE76_055393, gene-QYE76_055546, gene-QYE76_056092, gene-QYE76_057075, gene-QYE76_058209, gene-QYE76_058211, gene-QYE76_059152, gene-QYE76_059231, gene-QYE76_062792, gene-QYE76_064057, gene-QYE76_064395, gene-QYE76_064810, gene-QYE76_064948, gene-QYE76_065009, gene-QYE76_065263, gene-QYE76_065283, gene-QYE76_065685, gene-QYE76_067378, gene-QYE76_067404, gene-QYE76_067521, gene-QYE76_067900, gene-QYE76_068259, gene-QYE76_068893, gene-QYE76_069293, gene-QYE76_070381, gene-QYE76_070869, gene-QYE76_071057, gene-QYE76_071232, gene-QYE76_071244, gene-QYE76_071410, gene-QYE76_071468