Basic Information
Locus ID:
gene-QYE76_045879
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Pfam:UBN2_2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 275802455 | 275807566 | + | gene-QYE76_045879 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.79 | 63,866.88 Da | 49.74 | 66.52 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 57 | 191 | 5.8E-19 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 244 | 278 | 7.12E-5 | IPR036875 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 261 | 274 | 8.515406 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 389 | 472 | - | - |
| Coils | Coil | Coil | 180 | 200 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020191183.1 | endochitinase A-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q94HW2 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1 | 0 | |
| TrEMBL | M8BVQ9 | Putative receptor protein kinase ZmPK1 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 25 | gene-QYE76_002067, gene-QYE76_002068, gene-QYE76_008283 ... |