Basic Information
Locus ID:
gene-QYE76_045837
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Poly(A) polymerase central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 274899292 | 274900992 | - | gene-QYE76_045837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 63,169.66 Da | 53.61 | 85.60 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05402 | NT_PAP_TUTase | 50 | 205 | 8.54402E-23 | - |
| Pfam | PF01909 | Nucleotidyltransferase domain | 87 | 149 | 2.7E-6 | IPR002934 |
| Pfam | PF04928 | Poly(A) polymerase central domain | 13 | 361 | 8.3E-98 | IPR007012 |
| Pfam | PF04926 | Poly(A) polymerase predicted RNA binding domain | 427 | 493 | 4.8E-6 | IPR007010 |
| Pfam | PF04926 | Poly(A) polymerase predicted RNA binding domain | 365 | 424 | 9.5E-11 | IPR007010 |
| SUPERFAMILY | SSF81631 | PAP/OAS1 substrate-binding domain | 206 | 362 | 8.11E-56 | - |
| SUPERFAMILY | SSF81301 | Nucleotidyltransferase | 13 | 203 | 3.64E-45 | IPR043519 |
| SUPERFAMILY | SSF55003 | PAP/Archaeal CCA-adding enzyme, C-terminal domain | 364 | 492 | 6.08E-32 | IPR011068 |
| Gene3D | G3DSA:1.10.1410.10 | - | 13 | 360 | 1.6E-137 | - |
| Gene3D | G3DSA:3.30.70.590 | Poly(A) polymerase predicted RNA binding domain | 364 | 482 | 2.0E-27 | - |
| Gene3D | G3DSA:3.30.460.10 | Beta Polymerase, domain 2 | 43 | 199 | 1.6E-137 | IPR043519 |
| PIRSF | PIRSF018425 | PolyA_polymerase | 1 | 561 | 6.1E-189 | IPR014492 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 566 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 566 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25850.9 | - | 0 |
| RefSeq | XP_047063756.1 | nuclear poly(A) polymerase 2-like [Lolium rigidum] | 0 |
| O82312 | Nuclear poly(A) polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=PAPS2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I6WYS7 | Poly(A) polymerase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology