Basic Information
Locus ID:
gene-QYE76_045834
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 274862221 | 274869497 | - | gene-QYE76_045834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 171,518.66 Da | 40.45 | 103.33 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 339 | 627 | 4.77787E-94 | IPR044746 |
| CDD | cd03250 | ABCC_MRP_domain1 | 653 | 853 | 5.27727E-107 | - |
| CDD | cd03244 | ABCC_MRP_domain2 | 1286 | 1506 | 1.0584E-123 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 971 | 1263 | 2.78798E-92 | IPR044726 |
| Pfam | PF00005 | ABC transporter | 1305 | 1453 | 4.3E-29 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 672 | 805 | 1.4E-18 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 1005 | 1215 | 6.9E-31 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 338 | 606 | 1.4E-27 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1278 | 1513 | 7.63E-67 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 648 | 870 | 6.07E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 971 | 1268 | 7.19E-52 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 333 | 635 | 2.22E-35 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 661 | 905 | 2.9E-68 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 314 | 636 | 2.1E-50 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1271 | 1524 | 1.1E-81 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 933 | 1269 | 4.6E-58 | IPR036640 |
| SMART | SM00382 | AAA_5 | 680 | 853 | 1.2E-9 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1314 | 1506 | 7.6E-11 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 653 | 876 | 21.662109 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 338 | 619 | 35.213928 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1290 | 1522 | 16.573435 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 971 | 1251 | 35.415478 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 778 | 792 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 926 | 945 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_047071122.1 | putative ABC transporter C family member 15 [Lolium rigidum] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6CEZ1 | ABC transmembrane type-1 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology