Basic Information
Locus ID:
gene-QYE76_045732
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 271211069 | 271211650 | + | gene-QYE76_045732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 21,141.98 Da | 63.84 | 88.60 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 127 | 174 | 9.31941E-10 | - |
| Pfam | PF13639 | Ring finger domain | 127 | 174 | 2.6E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 120 | 179 | 2.99E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 83 | 178 | 3.1E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 127 | 173 | 1.2E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 127 | 174 | 12.577796 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 117 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051211950.1 | brassinosteroid-responsive RING protein 1-like [Lolium perenne] | 0 |
| TrEMBL | A0A453CKM9 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g32340 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2041, BH09.2198, CH09.2347 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0306430, gene-QOZ80_4BG0337430 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_045732, gene-QYE76_064127 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g49170.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G197400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0703590, Pt_Chr0703595 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr25G004870 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G677900 |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G413100.1.cds1, TraesCS2D02G392600.1.cds1 |
| Poaceae | Zea mays | 1 | Zm00001eb073040_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5640 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21839 |