halophFGD

Basic Information

Locus ID: gene-QYE76_045280

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Plant mobile domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	256470952	256477610	-	gene-QYE76_045280

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.72	135,575.83 Da	52.61	66.62	-0.61

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03108	MuDR family transposase	55	118	6.5E-8	IPR004332
Pfam	PF10536	Plant mobile domain	341	681	1.6E-49	IPR019557
SUPERFAMILY	SSF54171	DNA-binding domain	1094	1144	6.21E-10	IPR016177
Gene3D	G3DSA:3.30.730.10	AP2/ERF domain	1088	1144	1.7E-11	IPR036955
SMART	SM00380	rav1_2	1090	1149	1.4E-4	IPR001471
ProSiteProfiles	PS51032	AP2/ERF domain profile.	1079	1143	14.315096	IPR001471
MobiDBLite	mobidb-lite	consensus disorder prediction	825	839	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	29	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	21	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	819	861	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	882	902	-	-

Gene Ontology

Biological Process:

GO:0006355 (regulation of DNA-templated transcription)

Molecular Function:

Best hit

Source	Best Hit ID	Description
TAIR	AT1G48120.1	hydrolases;protein serine/threonine phosphatases.
RefSeq	XP_051203757.1	serine/threonine-protein phosphatase 7 long form homolog [Lolium perenne]
Swiss-Prot	Q9LNG5	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1
TrEMBL	Q2R334	Transposable element protein, putative, MuDR OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g33290 PE=4 SV=2

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	40	gene-QYE76_003106, gene-QYE76_004905, gene-QYE76_007129 ... gene-QYE76_007459, gene-QYE76_007460, gene-QYE76_007678, gene-QYE76_008699, gene-QYE76_009652, gene-QYE76_010827, gene-QYE76_011172, gene-QYE76_016027, gene-QYE76_017898, gene-QYE76_024787, gene-QYE76_026183, gene-QYE76_031125, gene-QYE76_031920, gene-QYE76_031925, gene-QYE76_032983, gene-QYE76_034251, gene-QYE76_035075, gene-QYE76_036400, gene-QYE76_037581, gene-QYE76_037987, gene-QYE76_037998, gene-QYE76_037999, gene-QYE76_040991, gene-QYE76_041373, gene-QYE76_041718, gene-QYE76_045280, gene-QYE76_047443, gene-QYE76_049160, gene-QYE76_051154, gene-QYE76_054532, gene-QYE76_058190, gene-QYE76_059907, gene-QYE76_060651, gene-QYE76_062629, gene-QYE76_067714, gene-QYE76_069777, gene-QYE76_071208
Poaceae	Oryza coarctata	1	Oco04G018420
Poaceae	Triticum dicoccoides	1	gene_TRIDC5BG047900