Basic Information
Locus ID:
gene-QYE76_045259
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 255554977 | 255559255 | - | gene-QYE76_045259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 54,655.30 Da | 67.25 | 77.81 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02123 | PA_C_RZF_like | 14 | 150 | 5.96397E-45 | IPR044744 |
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 236 | 279 | 1.80249E-22 | - |
| Pfam | PF13639 | Ring finger domain | 236 | 279 | 6.3E-12 | IPR001841 |
| Pfam | PF02225 | PA domain | 84 | 145 | 2.6E-9 | IPR003137 |
| SUPERFAMILY | SSF57850 | RING/U-box | 215 | 285 | 2.76E-19 | - |
| SUPERFAMILY | SSF52025 | PA domain | 84 | 125 | 2.35E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 198 | 284 | 4.7E-20 | IPR013083 |
| Gene3D | G3DSA:3.50.30.30 | - | 18 | 159 | 5.3E-27 | - |
| SMART | SM00184 | ring_2 | 237 | 278 | 1.8E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 237 | 279 | 12.326995 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 480 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71980.1 | Protease-associated (PA) RING/U-box zinc finger family protein. | 0 |
| RefSeq | XP_047082244.1 | receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q69U49 | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RMR1 PE=2 SV=2 | 0 | |
| TrEMBL | M0Y4Y0 | Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology