Basic Information
Locus ID:
gene-QYE76_045217
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 254453459 | 254459181 | - | gene-QYE76_045217 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 196,125.73 Da | 40.53 | 100.05 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1510 | 1780 | 3.4234E-83 | - |
| CDD | cd01650 | RT_nLTR_like | 365 | 583 | 3.44352E-36 | - |
| Pfam | PF13855 | Leucine rich repeat | 227 | 286 | 1.8E-7 | IPR001611 |
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 848 | 928 | 1.2E-16 | IPR026960 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 366 | 582 | 1.9E-29 | IPR000477 |
| Pfam | PF00069 | Protein kinase domain | 1506 | 1774 | 2.4E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 154 | 215 | 8.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 1190 | 1399 | 6.46E-48 | - |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 370 | 554 | 1.33E-14 | IPR043502 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1486 | 1778 | 2.87E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 17 | 366 | 1.26E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1014 | 1249 | 6.8E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 103 | 379 | 4.7E-77 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1009 | 1114 | 5.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1465 | 1575 | 1.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1115 | 1432 | 2.0E-91 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1576 | 1789 | 2.6E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 102 | 2.6E-7 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 179 | 202 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1504 | 1778 | 1.5E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 1283 | 1306 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1235 | 1259 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1356 | 1380 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 297 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1041 | 1065 | 330.0 | IPR003591 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 307 | 583 | 14.328351 | IPR000477 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 180 | 203 | 7.142103 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1504 | 1790 | 35.97599 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1621 | 1633 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1510 | 1532 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73080.1 | PEP1 receptor 1. Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. | 0 |
| RefSeq | XP_051211143.1 | uncharacterized protein LOC127328591 [Lolium perenne] | 0 |
| Q9SSL9 | Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana OX=3702 GN=PEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BZQ4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2137 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30166990 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G009110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711259, gene-LOC120108963 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1110.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g19500 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1251 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011074, Pov_00034559 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.2526, AH01.2527, BH01.2855, BH01.2857, CH01.3064 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0120090, gene-QOZ80_2AG0120110 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0108800.1, HORVU.MOREX.r3.5HG0480440.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_005384, gene-QYE76_045167, gene-QYE76_045217 |
| Poaceae | Oryza coarctata | 2 | Oco20G001010, Oco20G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g06740.1, LOC_Os10g06760.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G254700, gene-BS78_01G254800 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0301897, Pt_Chr0301916, Pt_Chr0301917, Pt_Chr0701996 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G016710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G197400, Tel5E01G350100 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG010300, gene_TRIDC5AG034110 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G090100.1.cds1, TraesCS2B02G105800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb026550_P001, Zm00001eb034800_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42998 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13073 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g08480 |
| Salicaceae | Populus euphratica | 1 | populus_peu29401 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132631233, gene-LOC132632151, gene-LOC132632152 |
| Solanaceae | Solanum chilense | 2 | SOLCI004878800, SOLCI004878900 |
| Zosteraceae | Zostera marina | 1 | Zosma01g26240.v3.1 |