Basic Information
Locus ID:
gene-QYE76_044685
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 237050367 | 237060402 | + | gene-QYE76_044685 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 144,980.20 Da | 48.99 | 87.78 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01647 | RT_LTR | 770 | 894 | 4.01744E-28 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 988 | 1070 | 1.17617E-29 | - |
| CDD | cd00303 | retropepsin_like | 543 | 620 | 1.08243E-6 | - |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 957 | 1018 | 3.9E-16 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 729 | 1053 | 9.56E-90 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 841 | 900 | 4.8E-19 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 524 | 628 | 2.4E-7 | IPR021109 |
| Gene3D | G3DSA:3.30.70.270 | - | 903 | 996 | 9.8E-28 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 830 | 839 | 2.2E-19 | IPR043128 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 732 | 829 | 2.2E-19 | - |
| Coils | Coil | Coil | 1252 | 1272 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048538050.1 | uncharacterized protein LOC125516778, partial [Triticum urartu] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2N9F815 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10796 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 203 | gene-QYE76_000478, gene-QYE76_000950, gene-QYE76_001438 ... |