Basic Information
Locus ID:
gene-QYE76_044640
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ubiquitin fusion degradation protein UFD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 235787472 | 235789649 | + | gene-QYE76_044640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 40,272.13 Da | 54.28 | 69.57 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 15 | 186 | 7.1E-76 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 3 | 109 | 2.4E-40 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 111 | 184 | 9.3E-33 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 280 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38930.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_051217816.1 | uncharacterized protein LOC127335244 [Lolium perenne] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | I1J0U6 | Ubiquitin fusion degradation protein 1 homolog OS=Brachypodium distachyon OX=15368 GN=100841813 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology