Basic Information
Locus ID:
gene-QYE76_044347
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 226506231 | 226507412 | + | gene-QYE76_044347 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 41,950.39 Da | 67.68 | 70.43 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 199 | 242 | 1.56023E-16 | - |
| Pfam | PF13639 | Ring finger domain | 199 | 242 | 2.0E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 193 | 248 | 1.93E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 173 | 250 | 1.3E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 200 | 241 | 1.2E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 200 | 242 | 12.784338 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 317 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_047062385.1 | RING-H2 finger protein ATL51-like [Lolium rigidum] | 0 |
| Q9LX93 | E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1 | 0 | |
| TrEMBL | I1IYA8 | RING-type E3 ubiquitin transferase OS=Brachypodium distachyon OX=15368 GN=100836409 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology