Basic Information
Locus ID:
gene-QYE76_044278
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 224254427 | 224261627 | + | gene-QYE76_044278 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 86,751.56 Da | 54.92 | 78.24 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 218 | 325 | 2.6E-53 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 734 | - | - |
| Coils | Coil | Coil | 561 | 581 | - | - |
| Coils | Coil | Coil | 477 | 497 | - | - |
| Coils | Coil | Coil | 501 | 549 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051229665.1 | uncharacterized protein LOC127347527 [Lolium perenne] | 0 |
| TrEMBL | A0A8R7QJN3 | Transpos_assoc domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |