HalophFGD

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Basic Information
Locus ID: gene-QYE76_044269
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 224063187 224063738 - gene-QYE76_044269
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.14 20,089.72 Da 33.55 84.10 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 30 138 3.77845E-21 IPR002083
Pfam PF00917 MATH domain 32 134 1.5E-5 IPR002083
SUPERFAMILY SSF49599 TRAF domain-like 20 143 2.13E-25 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 18 143 5.4E-23 IPR008974
ProSiteProfiles PS50144 MATH/TRAF domain profile. 11 138 14.688943 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051211668.1 BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] 0
TrEMBL M8BPC1 TD and POZ domain-containing protein 3 OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH08.2117, AH08.2120, BH08.2227, BH08.2231, BH08.2233 ...
CH08.2406, CH08.2413, CH08.2414
Poaceae Eleusine coracana subsp. coracana 17 gene-QOZ80_7BG0590860, gene-QOZ80_8AG0629410 ...
gene-QOZ80_8AG0637760, gene-QOZ80_8AG0637770, gene-QOZ80_8AG0637780, gene-QOZ80_8AG0637790, gene-QOZ80_8AG0637810, gene-QOZ80_8AG0637840, gene-QOZ80_8AG0637850, gene-QOZ80_8AG0637860, gene-QOZ80_8AG0637870, gene-QOZ80_8BG0657720, gene-QOZ80_8BG0666280, gene-QOZ80_8BG0666290, gene-QOZ80_8BG0666300, gene-QOZ80_8BG0666310, gene-QOZ80_8BG0666330
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0022760.1.CDS1 ...
HORVU.MOREX.r3.7HG0664330.1.CDS1, HORVU.MOREX.r3.7HG0682430.1
Poaceae Lolium multiflorum 19 gene-QYE76_000085, gene-QYE76_009636, gene-QYE76_009638 ...
gene-QYE76_009646, gene-QYE76_009647, gene-QYE76_030105, gene-QYE76_030106, gene-QYE76_030107, gene-QYE76_030114, gene-QYE76_030115, gene-QYE76_030122, gene-QYE76_030164, gene-QYE76_030168, gene-QYE76_030169, gene-QYE76_030178, gene-QYE76_044268, gene-QYE76_044269, gene-QYE76_044273, gene-QYE76_044274
Poaceae Oryza coarctata 5 Oco15G010530, Oco15G010540, Oco15G010550, Oco15G010900 ...
Oco16G012000
Poaceae Oryza sativa 11 LOC_Os03g48120.1, LOC_Os08g40490.1, LOC_Os08g41120.1 ...
LOC_Os08g41150.1, LOC_Os08g41170.1, LOC_Os08g41180.1, LOC_Os08g41190.1, LOC_Os08g41200.1, LOC_Os08g41220.1, LOC_Os08g41240.1, LOC_Os09g06890.1
Poaceae Paspalum vaginatum 18 gene-BS78_07G112800, gene-BS78_07G194700 ...
gene-BS78_07G195100, gene-BS78_07G195200, gene-BS78_07G195400, gene-BS78_07G195500, gene-BS78_07G195600, gene-BS78_07G195800, gene-BS78_07G195900, gene-BS78_07G196000, gene-BS78_07G196100, gene-BS78_07G196400, gene-BS78_07G196500, gene-BS78_07G196600, gene-BS78_07G196700, gene-BS78_07G196900, gene-BS78_07G197000, gene-BS78_07G199000
Poaceae Puccinellia tenuiflora 8 Pt_Chr0403716, Pt_Chr0403738, Pt_Chr0403966, Pt_Chr0501975 ...
Pt_Chr0501977, Pt_Chr0502097, Pt_Chr0600381, Pt_Chr0704303
Poaceae Sporobolus alterniflorus 4 Chr16G017630, Chr17G016920, Chr17G016930, Chr17G016940
Poaceae Thinopyrum elongatum 9 Tel1E01G076000, Tel1E01G077100, Tel1E01G190600 ...
Tel1E01G190700, Tel1E01G191100, Tel1E01G191400, Tel7E01G450400, Tel7E01G450500, Tel7E01G450800
Poaceae Triticum dicoccoides 14 gene_TRIDC1AG004010, gene_TRIDC1AG017170 ...
gene_TRIDC1AG017180, gene_TRIDC1AG017240, gene_TRIDC1BG004930, gene_TRIDC1BG004970, gene_TRIDC1BG017630, gene_TRIDC1BG017640, gene_TRIDC2BG009930, gene_TRIDC4AG047600, gene_TRIDC7AG032950, gene_TRIDC7AG032960, gene_TRIDC7AG032970, gene_TRIDC7BG024090
Poaceae Triticum aestivum 23 TraesCS1A02G093100.1, TraesCS1A02G093500.1 ...
TraesCS1A02G093700.1, TraesCS1B02G044900.1.cds1, TraesCS1B02G050800.1.cds1, TraesCS1B02G120900.1, TraesCS1B02G121000.1.cds1, TraesCS1B02G121300.1.cds1, TraesCS1B02G121700.1.cds1, TraesCS1B02G121800.1, TraesCS1D02G036200.1.cds1, TraesCS1D02G036400.1.cds1, TraesCS1D02G102100.1.cds1, TraesCS1D02G102200.1.cds1, TraesCS1D02G102300.1, TraesCS7A02G255200.1.cds1, TraesCS7A02G255300.2, TraesCS7B02G080600.1.cds1, TraesCS7B02G151400.1.cds1, TraesCS7B02G151500.1, TraesCS7B02G151600.1.cds1, TraesCS7D02G176800.1.cds1, TraesCS7D02G253700.1.cds1
Poaceae Zea mays 9 Zm00001eb035890_P001, Zm00001eb035900_P001 ...
Zm00001eb035910_P001, Zm00001eb035940_P001, Zm00001eb174790_P001, Zm00001eb174830_P001, Zm00001eb174850_P001, Zm00001eb202820_P001, Zm00001eb328550_P001
Poaceae Zoysia japonica 5 nbis-gene-17476, nbis-gene-42645, nbis-gene-42646 ...
nbis-gene-55558, nbis-gene-57528
Poaceae Zoysia macrostachya 10 Zma_g13254, Zma_g23281, Zma_g23282, Zma_g23283, Zma_g23284 ...
Zma_g23286, Zma_g24396, Zma_g24397, Zma_g24398, Zma_g29496
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.