Basic Information
Locus ID:
gene-QYE76_044072
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DEAD/DEAH box helicase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 217545295 | 217553077 | + | gene-QYE76_044072 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 134,291.94 Da | 50.91 | 75.07 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17920 | DEXHc_RecQ | 438 | 636 | 1.24622E-99 | - |
| CDD | cd18794 | SF2_C_RecQ | 637 | 769 | 7.25346E-69 | - |
| Pfam | PF16124 | RecQ zinc-binding | 771 | 851 | 7.9E-16 | IPR032284 |
| Pfam | PF00570 | HRDC domain | 1006 | 1071 | 2.5E-12 | IPR002121 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 655 | 759 | 1.9E-16 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 449 | 616 | 5.0E-19 | IPR011545 |
| Pfam | PF09382 | RQC domain | 858 | 972 | 1.8E-20 | IPR018982 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 422 | 778 | 4.88E-42 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 635 | 899 | 5.91E-58 | IPR027417 |
| SUPERFAMILY | SSF47819 | HRDC-like | 997 | 1074 | 1.05E-14 | IPR010997 |
| Gene3D | G3DSA:3.40.50.300 | - | 637 | 853 | 1.8E-63 | IPR027417 |
| Gene3D | G3DSA:1.10.150.80 | HRDC domain | 996 | 1080 | 3.0E-20 | IPR044876 |
| Gene3D | G3DSA:1.10.10.10 | - | 858 | 967 | 7.1E-22 | IPR036388 |
| Gene3D | G3DSA:3.40.50.300 | - | 407 | 636 | 2.8E-91 | IPR027417 |
| SMART | SM00490 | helicmild6 | 679 | 760 | 5.7E-27 | IPR001650 |
| SMART | SM00487 | ultradead3 | 443 | 645 | 4.9E-29 | IPR014001 |
| SMART | SM00956 | RQC_2 | 860 | 970 | 3.0E-19 | IPR018982 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 439 | 911 | 9.5E-165 | IPR004589 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 455 | 629 | 22.115623 | IPR014001 |
| ProSiteProfiles | PS50206 | Rhodanese domain profile. | 669 | 707 | 9.156826 | IPR001763 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 654 | 806 | 20.104233 | IPR001650 |
| ProSiteProfiles | PS50967 | HRDC domain profile. | 1000 | 1081 | 17.849771 | IPR002121 |
| ProSitePatterns | PS00690 | DEAH-box subfamily ATP-dependent helicases signature. | 568 | 577 | - | IPR002464 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1080 | 1133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1080 | 1094 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10930.1 | DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. | 0 |
| RefSeq | XP_047066395.1 | ATP-dependent DNA helicase Q-like 4A isoform X1 [Lolium rigidum] | 0 |
| Q8L840 | ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PFT5 | DNA helicase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology