Basic Information
Locus ID:
gene-QYE76_043629
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
AFB3
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 201341009 | 201343535 | + | gene-QYE76_043629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 63,990.53 Da | 48.44 | 93.25 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18791 | Transport inhibitor response 1 protein domain | 61 | 107 | 4.7E-23 | IPR041101 |
| Pfam | PF18511 | F-box | 1 | 42 | 1.4E-18 | IPR041567 |
| Pfam | PF13516 | Leucine Rich repeat | 149 | 167 | 1.5 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 65 | 530 | 1.3E-35 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 36 | 2.22E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 40 | 7.5E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 575 | 1.6E-178 | IPR032675 |
| SMART | SM00256 | fbox_2 | 4 | 45 | 1.6E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 366 | 390 | 0.39 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 475 | 500 | 150.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 99 | 123 | 21.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 309 | 332 | 460.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 124 | 149 | 40.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 426 | 449 | 350.0 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26810.1 | auxin signaling F-box 2. | 0 |
| RefSeq | XP_047066213.1 | transport inhibitor response 1-like protein Os04g0395600 [Lolium rigidum] | 0 |
| Q7XVM8 | Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0395600 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6AZJ5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology