halophFGD

Basic Information

Locus ID: gene-QYE76_043377

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Bulb-type mannose-specific lectin

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	192088304	192098839	+	gene-QYE76_043377

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.48	67,637.65 Da	35.93	69.47	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00028	B_lectin	304	378	4.18546E-21	IPR001480
CDD	cd01098	PAN_AP_plant	395	455	5.43713E-10	-
Pfam	PF08276	PAN-like domain	395	435	8.6E-6	IPR003609
Pfam	PF00098	Zinc knuckle	40	55	1.4E-7	IPR001878
Pfam	PF01453	D-mannose binding lectin	306	388	2.0E-18	IPR001480
SUPERFAMILY	SSF51110	alpha-D-mannose-specific plant lectins	304	380	6.94E-24	IPR036426
SUPERFAMILY	SSF57756	Retrovirus zinc finger-like domains	29	63	7.5E-9	IPR036875
Gene3D	G3DSA:2.90.10.30	-	296	433	1.4E-15	-
Gene3D	G3DSA:4.10.60.10	-	31	65	4.2E-8	-
SMART	SM00108	blect_4	254	378	3.6E-15	IPR001480
SMART	SM00343	c2hcfinal6	39	55	1.6E-5	IPR001878
ProSiteProfiles	PS50158	Zinc finger CCHC-type profile.	40	55	11.119688	IPR001878
ProSiteProfiles	PS50927	Bulb-type lectin domain profile.	248	376	15.778211	IPR001480
MobiDBLite	mobidb-lite	consensus disorder prediction	1	22	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	601	625	-	-

Gene Ontology

Molecular Function:

GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G78820.1	D-mannose binding lectin protein with Apple-like carbohydrate-binding domain.
RefSeq	XP_051193510.1	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Lolium perenne]
Swiss-Prot	Q9ZVA1	EP1-like glycoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g78820 PE=2 SV=1
TrEMBL	A0A3B6AZK9	Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg49723
Asteraceae	Flaveria trinervia	3	Ftri16G33087, Ftri3G20908, Ftri8G30898
Poaceae	Lolium multiflorum	72	gene-QYE76_001045, gene-QYE76_002921, gene-QYE76_003125 ... gene-QYE76_003340, gene-QYE76_003915, gene-QYE76_003917, gene-QYE76_004923, gene-QYE76_005585, gene-QYE76_006139, gene-QYE76_006605, gene-QYE76_007873, gene-QYE76_008436, gene-QYE76_010084, gene-QYE76_011520, gene-QYE76_011953, gene-QYE76_012207, gene-QYE76_013020, gene-QYE76_013261, gene-QYE76_013644, gene-QYE76_014200, gene-QYE76_015017, gene-QYE76_022095, gene-QYE76_024919, gene-QYE76_025426, gene-QYE76_026897, gene-QYE76_027380, gene-QYE76_030158, gene-QYE76_030810, gene-QYE76_031198, gene-QYE76_031694, gene-QYE76_033544, gene-QYE76_034396, gene-QYE76_036129, gene-QYE76_036893, gene-QYE76_037055, gene-QYE76_037924, gene-QYE76_038468, gene-QYE76_039022, gene-QYE76_039134, gene-QYE76_043377, gene-QYE76_044275, gene-QYE76_048695, gene-QYE76_048902, gene-QYE76_049180, gene-QYE76_049287, gene-QYE76_049337, gene-QYE76_049648, gene-QYE76_050084, gene-QYE76_050146, gene-QYE76_050801, gene-QYE76_053034, gene-QYE76_057171, gene-QYE76_057271, gene-QYE76_057605, gene-QYE76_058294, gene-QYE76_058619, gene-QYE76_059435, gene-QYE76_060735, gene-QYE76_061320, gene-QYE76_061490, gene-QYE76_062413, gene-QYE76_063597, gene-QYE76_064028, gene-QYE76_064528, gene-QYE76_066514, gene-QYE76_066629, gene-QYE76_067159, gene-QYE76_067840, gene-QYE76_069241, gene-QYE76_069442, gene-QYE76_069523, gene-QYE76_069648