Basic Information
Locus ID:
gene-QYE76_043289
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 189107296 | 189112423 | - | gene-QYE76_043289 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 77,217.07 Da | 38.25 | 79.09 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 546 | 639 | 1.53499E-16 | - |
| SUPERFAMILY | SSF50630 | Acid proteases | 543 | 647 | 2.08E-7 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 524 | 660 | 6.6E-24 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 184 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045089081.1 | uncharacterized protein LOC123497118 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A7H4LI99 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS2948 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 35 | gene-QYE76_002238, gene-QYE76_002580, gene-QYE76_006006 ... |