Basic Information
Locus ID:
gene-QYE76_043288
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 188988181 | 188997446 | - | gene-QYE76_043288 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 161,311.67 Da | 46.38 | 83.81 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1096 | 1214 | 9.98251E-57 | - |
| CDD | cd00303 | retropepsin_like | 500 | 597 | 2.06343E-12 | - |
| CDD | cd01647 | RT_LTR | 807 | 1002 | 4.13288E-74 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 200 | 290 | 4.0E-9 | IPR005162 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 846 | 1001 | 6.5E-25 | IPR000477 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1065 | 1163 | 5.3E-34 | IPR041577 |
| SUPERFAMILY | SSF50630 | Acid proteases | 497 | 605 | 5.35E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 766 | 1197 | 4.11E-140 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 867 | 1002 | 1.2E-67 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 481 | 619 | 4.5E-18 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 769 | 927 | 1.2E-67 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 1011 | 1104 | 2.0E-27 | IPR043128 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 805 | 1009 | 8.773122 | IPR000477 |
| Coils | Coil | Coil | 1301 | 1321 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019098329.1 | PREDICTED: uncharacterized protein LOC109131614, partial [Camelina sativa] | 0 |
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |