Basic Information
Locus ID:
gene-QYE76_042995
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
catalytic domain of ctd-like phosphatases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 178584061 | 178594904 | - | gene-QYE76_042995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 115,191.79 Da | 53.07 | 73.92 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07521 | HAD_FCP1-like | 247 | 363 | 7.9732E-20 | - |
| Pfam | PF03031 | NLI interacting factor-like phosphatase | 253 | 361 | 1.8E-6 | IPR004274 |
| SUPERFAMILY | SSF54768 | dsRNA-binding domain-like | 830 | 905 | 7.61E-12 | - |
| SUPERFAMILY | SSF54768 | dsRNA-binding domain-like | 707 | 766 | 7.61E-9 | - |
| SUPERFAMILY | SSF56784 | HAD-like | 130 | 389 | 3.02E-20 | IPR036412 |
| Gene3D | G3DSA:3.30.160.20 | - | 704 | 770 | 3.4E-6 | - |
| Gene3D | G3DSA:3.40.50.1000 | - | 132 | 389 | 1.2E-24 | IPR023214 |
| Gene3D | G3DSA:3.30.160.20 | - | 823 | 909 | 4.2E-7 | - |
| SMART | SM00358 | DRBM_3 | 703 | 767 | 0.022 | IPR014720 |
| SMART | SM00577 | forpap2 | 196 | 372 | 6.9E-10 | IPR004274 |
| SMART | SM00358 | DRBM_3 | 829 | 896 | 3.0E-4 | IPR014720 |
| ProSiteProfiles | PS50137 | Double stranded RNA-binding domain (dsRBD) profile. | 731 | 768 | 11.018604 | IPR014720 |
| ProSiteProfiles | PS50137 | Double stranded RNA-binding domain (dsRBD) profile. | 828 | 897 | 11.601236 | IPR014720 |
| ProSiteProfiles | PS50969 | FCP1 homology domain profile. | 137 | 388 | 16.050774 | IPR004274 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 583 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21670.1 | C-terminal domain phosphatase-like 1. encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. | 0 |
| RefSeq | XP_051218371.1 | RNA polymerase II C-terminal domain phosphatase-like 1 [Lolium perenne] | 0 |
| Q5YDB6 | RNA polymerase II C-terminal domain phosphatase-like 1 OS=Arabidopsis thaliana OX=3702 GN=CPL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453CGF4 | protein-serine/threonine phosphatase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology