Basic Information
Locus ID:
gene-QYE76_042624
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 164977119 | 164981563 | + | gene-QYE76_042624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 74,836.11 Da | 50.02 | 64.16 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 177 | 270 | 5.8E-12 | IPR005162 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 459 | - | - |
| Coils | Coil | Coil | 590 | 610 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051183779.1 | uncharacterized protein LOC127297497 [Lolium perenne] | 0 |
| TrEMBL | A0A2T2PTT2 | Retrotrans_gag domain-containing protein OS=Bradyrhizobium sp. MOS002 OX=2133947 GN=C7G41_36765 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 77 | gene-QYE76_000700, gene-QYE76_000963, gene-QYE76_001054 ... |