Basic Information
Locus ID:
gene-QYE76_042498
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
HMT3
Description:
betaine-homocysteine S-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 160622383 | 160630627 | + | gene-QYE76_042498 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 66,679.21 Da | 37.74 | 88.07 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06222 | RNase_H_like | 457 | 577 | 1.00016E-20 | IPR044730 |
| Pfam | PF13456 | Reverse transcriptase-like | 457 | 578 | 2.7E-21 | IPR002156 |
| Pfam | PF02574 | Homocysteine S-methyltransferase | 21 | 293 | 2.6E-59 | IPR003726 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 289 | 388 | 2.0E-12 | IPR000477 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 16 | 287 | 7.46E-60 | IPR036589 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 454 | 583 | 2.66E-13 | IPR012337 |
| Gene3D | G3DSA:3.20.20.330 | - | 8 | 309 | 1.0E-78 | IPR036589 |
| Gene3D | G3DSA:3.30.420.10 | - | 454 | 587 | 5.6E-16 | IPR036397 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 345 | 32.626324 | IPR003726 |
| Coils | Coil | Coil | 372 | 392 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_051216184.1 | homocysteine S-methyltransferase 2-like [Lolium perenne] | 0 |
| Q9FUM9 | Homocysteine S-methyltransferase 2 OS=Zea mays OX=4577 GN=HMT-2 PE=2 SV=1 | 0 | |
| TrEMBL | A3C4V2 | Os10g0422200 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0422200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology