Basic Information
Locus ID:
gene-QYE76_042207
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 149562110 | 149568990 | - | gene-QYE76_042207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 131,005.00 Da | 43.95 | 84.55 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 424 | 521 | 1.6685E-12 | - |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 896 | 945 | 7.0E-11 | IPR041577 |
| Pfam | PF03732 | Retrotransposon gag protein | 124 | 214 | 3.1E-9 | IPR005162 |
| SUPERFAMILY | SSF50630 | Acid proteases | 421 | 529 | 4.11E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 691 | 946 | 1.07E-64 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 693 | 785 | 6.3E-12 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 786 | 843 | 3.8E-18 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 847 | 919 | 1.5E-15 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 404 | 543 | 3.3E-18 | IPR021109 |
| Coils | Coil | Coil | 1037 | 1057 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_023521407.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A6P6GDJ4 | RNA-directed DNA polymerase OS=Ziziphus jujuba OX=326968 GN=LOC112492555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |