Basic Information
Locus ID:
gene-QYE76_042088
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 145181765 | 145185418 | + | gene-QYE76_042088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 43,824.01 Da | 50.53 | 85.97 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 161 | 194 | 0.012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 129 | 150 | 0.25 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 68 | 337 | 1.68E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 47 | 336 | 3.0E-41 | IPR015943 |
| SMART | SM00320 | WD40_4 | 156 | 194 | 0.034 | IPR001680 |
| SMART | SM00320 | WD40_4 | 197 | 242 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 116 | 152 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 66 | 103 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 248 | 284 | 24.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 177 | 203 | 9.138305 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52190.1 | phosphate transporter traffic facilitator1. Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter. | 0 |
| RefSeq | XP_047068423.1 | SEC12-like protein 1 [Lolium rigidum] | 0 |
| Q8GYE0 | SEC12-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHF1 PE=1 SV=2 | 0 | |
| TrEMBL | F2E3M9 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology