Basic Information
Locus ID:
gene-QYE76_041914
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 138014253 | 138022422 | - | gene-QYE76_041914 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 140,656.22 Da | 49.24 | 83.18 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 445 | 524 | 5.76538E-8 | - |
| CDD | cd01647 | RT_LTR | 732 | 902 | 1.9358E-58 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 928 | 1035 | 3.32825E-50 | - |
| Pfam | PF17917 | RNase H-like domain found in reverse transcriptase | 927 | 1014 | 2.9E-27 | IPR041373 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 771 | 867 | 4.0E-13 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 692 | 1026 | 2.0E-92 | IPR043502 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 694 | 852 | 1.4E-47 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 792 | 868 | 1.4E-47 | IPR043128 |
| Gene3D | G3DSA:3.30.70.270 | - | 872 | 908 | 1.6E-8 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 426 | 536 | 1.1E-8 | IPR021109 |
| Gene3D | G3DSA:3.10.20.370 | - | 923 | 985 | 6.2E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| Coils | Coil | Coil | 1122 | 1142 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019098329.1 | PREDICTED: uncharacterized protein LOC109131614, partial [Camelina sativa] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A6D2KNX8 | RNA-directed DNA polymerase OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS41268 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |