Basic Information
Locus ID:
gene-QYE76_041818
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
CPK18
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 133411664 | 133413921 | + | gene-QYE76_041818 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 17,481.88 Da | 25.32 | 94.42 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13202 | EF hand | 98 | 120 | 4.2E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 80 | 152 | 7.82E-10 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 89 | 7.08E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3 | 50 | 1.0E-11 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 76 | 90 | 2.0E-16 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 66 | 140 | 2.0E-16 | - |
| SMART | SM00054 | efh_1 | 97 | 125 | 2.9E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 93 | 128 | 13.007053 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 106 | 118 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66210.4 | calcium-dependent protein kinase 28. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_047072263.1 | calcium-dependent protein kinase 18 isoform X3 [Lolium rigidum] | 0 |
| Q0D715 | Calcium-dependent protein kinase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453BKL3 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-QYE76_041818.