Basic Information
Locus ID:
gene-QYE76_041678
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 126860614 | 126869331 | - | gene-QYE76_041678 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 121,231.69 Da | 52.25 | 67.62 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 169 | 264 | 1.19143E-45 | - |
| CDD | cd13999 | STKc_MAP3K-like | 834 | 1090 | 6.48235E-113 | - |
| Pfam | PF00564 | PB1 domain | 182 | 266 | 2.8E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 830 | 1089 | 5.0E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 820 | 1087 | 4.05E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 181 | 271 | 2.71E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 821 | 915 | 3.8E-26 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 184 | 267 | 1.1E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 916 | 1105 | 4.9E-54 | - |
| SMART | SM00666 | PB1_new | 180 | 267 | 8.3E-33 | IPR000270 |
| SMART | SM00220 | serkin_6 | 828 | 1096 | 1.0E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 828 | 1095 | 41.926403 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 952 | 964 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 834 | 859 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 946 | 964 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1017 | 1039 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1061 | 1083 | 1.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 910 | 923 | 1.1E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_051215863.1 | serine/threonine-protein kinase STE20-like isoform X3 [Lolium perenne] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | I1GUW2 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100828846 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology