halophFGD

Basic Information

Locus ID: gene-QYE76_041661

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: FAR1 DNA-binding domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	125876636	125881862	+	gene-QYE76_041661

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.20	79,451.71 Da	43.65	80.22	-0.44

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00303	retropepsin_like	356	445	2.1616E-16	-
Pfam	PF10551	MULE transposase domain	115	209	2.5E-27	IPR018289
Pfam	PF03101	FAR1 DNA-binding domain	24	100	2.9E-14	IPR004330
Gene3D	G3DSA:2.40.70.10	Acid Proteases	335	464	1.1E-8	IPR021109

KEGG Pathway

KO Term:

K17604 (zinc finger SWIM domain-containing protein 3)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_047078154.1	protein FAR1-RELATED SEQUENCE 5-like [Lolium rigidum]	0
TrEMBL	A0A453K0L1	Protein FAR1-RELATED SEQUENCE OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Lolium multiflorum	33	gene-QYE76_000029, gene-QYE76_000961, gene-QYE76_010060 ... gene-QYE76_011323, gene-QYE76_013544, gene-QYE76_014765, gene-QYE76_014918, gene-QYE76_015413, gene-QYE76_017167, gene-QYE76_017195, gene-QYE76_018378, gene-QYE76_019351, gene-QYE76_019437, gene-QYE76_023366, gene-QYE76_023873, gene-QYE76_024114, gene-QYE76_029274, gene-QYE76_029597, gene-QYE76_031103, gene-QYE76_032119, gene-QYE76_033883, gene-QYE76_035582, gene-QYE76_038949, gene-QYE76_039404, gene-QYE76_041661, gene-QYE76_042025, gene-QYE76_042985, gene-QYE76_048640, gene-QYE76_052538, gene-QYE76_053570, gene-QYE76_059514, gene-QYE76_068946, gene-QYE76_069958