Basic Information
Locus ID:
gene-QYE76_041477
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RNA recognition motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 118668731 | 118670619 | + | gene-QYE76_041477 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 64,048.36 Da | 49.58 | 85.22 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00590 | RRM_SF | 444 | 516 | 2.74622E-13 | - |
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 444 | 513 | 4.5E-13 | IPR000504 |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 307 | 360 | 3.0E-6 | IPR005174 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 424 | 530 | 8.06E-17 | IPR035979 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 44 | 2.09E-5 | IPR036047 |
| Gene3D | G3DSA:3.30.70.330 | - | 406 | 520 | 1.2E-15 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 443 | 516 | 5.7E-14 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 442 | 520 | 12.645612 | IPR000504 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051212457.1 | uncharacterized protein LOC127330214 [Lolium perenne] | 0 |
| TrEMBL | A0A8I6WEU5 | RRM domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology