Basic Information
Locus ID:
gene-QYE76_041449
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
RNA recognition motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 117663864 | 117665917 | + | gene-QYE76_041449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 59,849.12 Da | 49.88 | 80.27 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00590 | RRM_SF | 445 | 506 | 1.65188E-8 | - |
| Pfam | PF03478 | Protein of unknown function (DUF295) | 309 | 361 | 1.2E-6 | IPR005174 |
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 445 | 506 | 7.7E-10 | IPR000504 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 44 | 1.96E-5 | IPR036047 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 431 | 509 | 9.81E-11 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 442 | 513 | 2.2E-11 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 444 | 517 | 7.2E-6 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 443 | 527 | 10.905961 | IPR000504 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051212457.1 | uncharacterized protein LOC127330214 [Lolium perenne] | 0 |
| TrEMBL | A0A8I6WEU5 | RRM domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology