Basic Information
Locus ID:
gene-QYE76_041261
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 110457335 | 110459141 | + | gene-QYE76_041261 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 52,004.87 Da | 49.44 | 71.93 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 172 | 444 | 3.06524E-44 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 270 | 305 | 1.0E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 188 | 247 | 9.1E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 409 | 444 | 9.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 321 | 359 | 0.0043 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 164 | 444 | 4.17E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 98 | 447 | 1.4E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 224 | 262 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 317 | 359 | 2.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 182 | 221 | 1.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 362 | 402 | 400.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 405 | 444 | 8.8E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 266 | 305 | 6.5E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 273 | 307 | 11.708317 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 412 | 445 | 12.74747 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 273 | 314 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 189 | 226 | 8.808332 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 189 | 230 | 12.01227 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 412 | 445 | 10.601049 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 431 | 445 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 292 | 306 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_047070632.1 | cell division cycle 20.2, cofactor of APC complex-like isoform X1 [Lolium rigidum] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | I1ICW9 | ANAPC4_WD40 domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100835337 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology