Basic Information
Locus ID:
gene-QYE76_040716
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
F-box FBD LRR-repeat protein At4g03220
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 89200513 | 89204245 | + | gene-QYE76_040716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 39,049.26 Da | 44.62 | 103.36 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 40 | 2.0E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 166 | 284 | 3.73E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 51 | 3.27E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 51 | 6.1E-7 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 4.1E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 48 | 9.894885 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 141 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32375.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_004959734.1 | putative F-box/FBD/LRR-repeat protein At4g03220 [Setaria italica] | 0 |
| Q9LQM1 | Probable FBD-associated F-box protein At1g32375 OS=Arabidopsis thaliana OX=3702 GN=At1g32375 PE=4 SV=2 | 0 | |
| TrEMBL | A0A811N8J5 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS13214 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH03.3295 |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_7AG0571210, gene-QOZ80_7AG0571240 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040714, gene-QYE76_040716 |
| Poaceae | Oryza coarctata | 2 | Oco13G009510, Oco14G010080 |
| Poaceae | Oryza sativa | 4 | LOC_Os07g36280.1, LOC_Os07g36290.1, LOC_Os07g36300.1 ... |
| Poaceae | Sporobolus alterniflorus | 6 | Chr19G004900, Chr24G009450, Chr24G009460, Chr24G009470 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-769 |