Basic Information
Locus ID:
gene-QYE76_040714
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
F-box FBD LRR-repeat protein At4g03220
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 89175805 | 89179083 | + | gene-QYE76_040714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 67,190.67 Da | 52.24 | 84.62 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 40 | 4.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 51 | 7.06E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 50 | 1.4E-6 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 4.1E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 48 | 9.894885 | IPR001810 |
| PRINTS | PR01217 | Proline rich extensin signature | 477 | 494 | 1.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 447 | 463 | 1.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 523 | 548 | 1.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 380 | 392 | 1.8E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 426 | 447 | 1.8E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 141 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04230.1 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_039797853.1 | F-box/FBD/LRR-repeat protein At2g04230-like [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0VL47 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG537700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH03.3295 |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_7AG0571210, gene-QOZ80_7AG0571240 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_040714, gene-QYE76_040716 |
| Poaceae | Oryza coarctata | 2 | Oco13G009510, Oco14G010080 |
| Poaceae | Oryza sativa | 4 | LOC_Os07g36280.1, LOC_Os07g36290.1, LOC_Os07g36300.1 ... |
| Poaceae | Sporobolus alterniflorus | 6 | Chr19G004900, Chr24G009450, Chr24G009460, Chr24G009470 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-769 |