Basic Information
Locus ID:
gene-QYE76_040115
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein modification by small protein conjugation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 65704263 | 65713116 | - | gene-QYE76_040115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 124,056.12 Da | 51.85 | 66.70 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 570 | 705 | 2.37171E-54 | IPR000608 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 352 | 9.2E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 369 | 439 | 2.0E-16 | IPR012946 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 572 | 703 | 3.9E-38 | IPR000608 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 352 | 1.25E-76 | IPR017853 |
| SUPERFAMILY | SSF54495 | UBC-like | 556 | 708 | 1.79E-49 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 558 | 707 | 5.8E-52 | IPR016135 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 358 | 4.5E-109 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 365 | 457 | 2.9E-7 | - |
| SMART | SM00212 | ubc_7 | 570 | 710 | 9.7E-54 | - |
| SMART | SM00768 | X8_cls | 368 | 453 | 6.1E-40 | IPR012946 |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 567 | 710 | 46.364208 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 867 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 939 | 1007 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 1009 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_047064869.1 | glucan endo-1,3-beta-glucosidase 4-like [Lolium rigidum] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | M8CLZ1 | Glucan endo-1,3-beta-glucosidase 4 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology