Basic Information
Locus ID:
gene-QYE76_040098
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
B3 DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 65289717 | 65296663 | - | gene-QYE76_040098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 41,903.73 Da | 45.75 | 63.78 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 52 | 129 | 2.6992E-15 | IPR003340 |
| Pfam | PF02362 | B3 DNA binding domain | 52 | 130 | 1.1E-11 | IPR003340 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 38 | 129 | 2.55E-15 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 35 | 132 | 6.1E-15 | IPR015300 |
| SMART | SM01019 | B3_2 | 38 | 131 | 8.0E-6 | IPR003340 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 35 | 131 | 11.293131 | IPR003340 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051192320.1 | uncharacterized protein LOC127305832 isoform X1 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6QN69 | TF-B3 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 272 | gene-QYE76_000070, gene-QYE76_000854, gene-QYE76_001188 ... |