Basic Information
Locus ID:
gene-QYE76_039716
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 52343293 | 52353305 | - | gene-QYE76_039716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 66,927.58 Da | 41.68 | 87.33 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 54 | 215 | 8.3E-17 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 385 | 430 | 7.1E-6 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 52 | 222 | 2.08E-29 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 53 | 224 | 1.6E-31 | IPR036465 |
| SMART | SM00327 | VWA_4 | 52 | 226 | 1.9E-22 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 54 | 221 | 17.279455 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 458 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_051214908.1 | uncharacterized protein LOC127332629 [Lolium perenne] | 0 |
| Q8BJD1 | Inter-alpha-trypsin inhibitor heavy chain H5 OS=Mus musculus OX=10090 GN=Itih5 PE=1 SV=1 | 0 | |
| TrEMBL | B8AXM1 | VWFA domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_18329 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 8 | AH05.388, AH05.865, AH05.867, BH01.4317, BH01.4319, BH05.448 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0670800, gene-QOZ80_9AG0675400 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_039716, gene-QYE76_058228, gene-QYE76_058230 ... |
| Poaceae | Oryza coarctata | 2 | Oco09G001520, Oco09G001530 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0605438, Pt_Chr0605787 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-18273, nbis-gene-53961, nbis-gene-53963 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g17598 |