Basic Information
Locus ID:
gene-QYE76_039696
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
MULE transposase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 51865867 | 51871145 | + | gene-QYE76_039696 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 99,175.04 Da | 51.74 | 61.97 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 160 | 239 | 8.7E-13 | IPR004330 |
| Pfam | PF10551 | MULE transposase domain | 362 | 454 | 4.1E-27 | IPR018289 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 823 | 869 | 8.37E-6 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 819 | 872 | 2.7E-5 | - |
| SMART | SM00343 | c2hcfinal6 | 826 | 842 | 0.14 | IPR001878 |
| SMART | SM00343 | c2hcfinal6 | 853 | 869 | 0.045 | IPR001878 |
| SMART | SM00575 | 26again6 | 656 | 683 | 0.0096 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 645 | 681 | 9.210716 | IPR007527 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 853 | 867 | 8.647267 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 795 | 817 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 100 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 0 |
| RefSeq | XP_047062191.1 | protein FAR1-RELATED SEQUENCE 5-like [Lolium rigidum] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 0 | |
| TrEMBL | F2CY46 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology