Basic Information
Locus ID:
gene-QYE76_038992
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 31753928 | 31754458 | + | gene-QYE76_038992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 18,835.24 Da | 48.06 | 91.65 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 103 | 165 | 1.19656E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 102 | 164 | 1.8E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 25 | 86 | 3.1E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 12 | 166 | 1.46E-37 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 97 | 170 | 8.1E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 13 | 96 | 1.4E-16 | - |
| SMART | SM00054 | efh_1 | 103 | 131 | 2.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 26 | 54 | 0.33 | IPR002048 |
| SMART | SM00054 | efh_1 | 62 | 90 | 1.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 139 | 167 | 6.0E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 135 | 170 | 12.979158 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 99 | 134 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 58 | 93 | 10.245409 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 22 | 57 | 12.170192 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 35 | 47 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 148 | 160 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 112 | 124 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 71 | 83 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_051184913.1 | probable calcium-binding protein CML14 [Lolium perenne] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6W8H9 | Calcium-binding protein CML15 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology