HalophFGD

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Basic Information
Locus ID: gene-QYE76_038983
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 31264100 31267091 - gene-QYE76_038983
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.95 69,116.02 Da 42.36 82.66 -0.49
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 87 122 1.2E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 84 137 1.19E-9 IPR036047
SUPERFAMILY SSF52058 L domain-like 215 518 4.76E-7 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 211 306 3.0E-7 IPR032675
Gene3D G3DSA:1.20.1280.50 - 83 147 1.1E-7 -
MobiDBLite mobidb-lite consensus disorder prediction 326 370 - -
MobiDBLite mobidb-lite consensus disorder prediction 326 364 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G38392.1 - 0
RefSeq XP_051213843.1 uncharacterized protein LOC127331703 [Lolium perenne] 0
TrEMBL A0A3B6C0U7 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 12 AH05.1153, AH07.1109, AH07.694, AH08.586, AH08.591, AH08.592 ...
AH08.593, AH08.594, BH07.824, BH08.639, CH05.1355, CH08.730
Poaceae Eleusine coracana subsp. coracana 11 gene-QOZ80_8AG0620710, gene-QOZ80_8AG0620730 ...
gene-QOZ80_8AG0620740, gene-QOZ80_8AG0620780, gene-QOZ80_8AG0620800, gene-QOZ80_8AG0620870, gene-QOZ80_8BG0652330, gene-QOZ80_8BG0652400, gene-QOZ80_8BG0652420, gene-QOZ80_8BG0652480, gene-QOZ80_9AG0685400
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.1HG0038960.1, HORVU.MOREX.r3.1HG0038990.1 ...
HORVU.MOREX.r3.1HG0038980.1.CDS1, HORVU.MOREX.r3.2HG0213510.1, HORVU.MOREX.r3.5HG0534780.1, HORVU.MOREX.r3.7HG0648190.1, HORVU.MOREX.r3.7HG0649320.1, HORVU.MOREX.r3.7HG0701270.1
Poaceae Lolium multiflorum 16 gene-QYE76_008238, gene-QYE76_032254, gene-QYE76_032481 ...
gene-QYE76_038981, gene-QYE76_038983, gene-QYE76_038986, gene-QYE76_038987, gene-QYE76_040192, gene-QYE76_040193, gene-QYE76_040331, gene-QYE76_040547, gene-QYE76_040550, gene-QYE76_040551, gene-QYE76_040553, gene-QYE76_067650, gene-QYE76_067653
Poaceae Oryza coarctata 9 Oco15G003840, Oco15G003850, Oco15G005330, Oco16G003710 ...
Oco16G003720, Oco16G003730, Oco16G003740, Oco16G005080, Oco16G007060
Poaceae Oryza sativa 13 LOC_Os02g09580.1, LOC_Os08g09710.1, LOC_Os08g09715.1 ...
LOC_Os08g09720.1, LOC_Os08g09730.1, LOC_Os08g09740.1, LOC_Os08g09750.1, LOC_Os08g09760.1, LOC_Os08g09780.1, LOC_Os08g09790.1, LOC_Os08g09910.1, LOC_Os08g09920.1, LOC_Os08g16860.1
Poaceae Paspalum vaginatum 4 gene-BS78_07G078200, gene-BS78_07G078300 ...
gene-BS78_07G078400, gene-BS78_07G078600
Poaceae Puccinellia tenuiflora 10 Pt_Chr0205856, Pt_Chr0304499, Pt_Chr0304500, Pt_Chr0304577 ...
Pt_Chr0502200, Pt_Chr0504563, Pt_Chr0700135, Pt_Chr0700139, Pt_Chr0704764, Pt_Chr0704894
Poaceae Sporobolus alterniflorus 10 Chr20G010380, Chr20G010390, Chr20G010400, Chr20G010410 ...
Chr20G010420, Chr29G009990, Chr29G010000, Chr29G010010, Chr29G010020, Chr29G010030
Poaceae Thinopyrum elongatum 10 Tel2E01G257500, Tel2E01G257800, Tel2E01G976600 ...
Tel2E01G976800, Tel5E01G013500, Tel5E01G853000, Tel5E01G856600, Tel7E01G177300, Tel7E01G189500, Tel7E01G647600
Poaceae Triticum dicoccoides 23 gene_TRIDC2AG014810, gene_TRIDC2AG014820 ...
gene_TRIDC2AG014830, gene_TRIDC2AG014850, gene_TRIDC2AG014870, gene_TRIDC2AG015020, gene_TRIDC2AG015030, gene_TRIDC2AG025260, gene_TRIDC2AG078790, gene_TRIDC2BG017850, gene_TRIDC2BG017870, gene_TRIDC2BG017890, gene_TRIDC2BG017910, gene_TRIDC2BG017920, gene_TRIDC2BG018010, gene_TRIDC2BG086990, gene_TRIDC3AG074950, gene_TRIDC4AG049810, gene_TRIDC4AG058130, gene_TRIDC4AG059410, gene_TRIDC7AG010440, gene_TRIDC7AG042620, gene_TRIDC7BG033780
Poaceae Triticum aestivum 51 TraesCS2A02G121400.1, TraesCS2A02G121500.1 ...
TraesCS2A02G121600.1, TraesCS2A02G121700.1, TraesCS2A02G196300.1, TraesCS2B02G142100.1, TraesCS2B02G142200.1, TraesCS2B02G142400.1, TraesCS2B02G142500.1, TraesCS2B02G142800.1, TraesCS2B02G142900.1, TraesCS2B02G143100.1, TraesCS2B02G143200.1, TraesCS2B02G598900.1, TraesCS2B02G599100.1, TraesCS2B02G599200.1, TraesCS2D02G123500.1, TraesCS2D02G123600.1, TraesCS2D02G124100.1, TraesCS2D02G124200.1, TraesCS2D02G593600.1, TraesCS2D02G593800.1, TraesCS3B02G598300.1, TraesCS3B02G599000.1, TraesCS4A02G329700.1, TraesCS4A02G329900.1, TraesCS4A02G390700.1, TraesCS4B02G025000.1, TraesCS4B02G025100.2, TraesCS5A02G005000.1, TraesCS5A02G005700.1, TraesCS5D02G006900.1, TraesCS5D02G011700.1, TraesCS5D02G543200.1, TraesCS7A02G090800.1, TraesCS7B02G205700.1, TraesCS7B02G284600.1, TraesCS7D02G079300.1, TraesCS7D02G086100.1, TraesCS7D02G302100.1, TraesCS7D02G378600.1, TraesCSU02G037100.1, TraesCSU02G037300.1, TraesCSU02G037400.1, TraesCSU02G163000.1.cds1, TraesCSU02G163100.2, TraesCSU02G174600.1, TraesCSU02G180300.1, TraesCSU02G180700.1, TraesCSU02G192600.1, TraesCSU02G248900.1.cds1
Poaceae Zea mays 1 Zm00001eb171210_P002
Poaceae Zoysia japonica 5 nbis-gene-23586, nbis-gene-23587, nbis-gene-48563 ...
nbis-gene-51333, nbis-gene-51334
Poaceae Zoysia macrostachya 2 Zma_g22619, Zma_g26540
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.