HalophFGD

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Basic Information
Locus ID: gene-QYE76_038981
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 31180554 31182167 - gene-QYE76_038981
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.18 59,347.02 Da 49.97 72.29 -0.72
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 31 66 3.1E-4 IPR001810
SUPERFAMILY SSF52047 RNI-like 158 236 6.87E-9 -
SUPERFAMILY SSF81383 F-box domain 24 77 4.71E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 28 87 4.0E-8 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 142 236 1.6E-6 IPR032675
ProSiteProfiles PS50181 F-box domain profile. 29 65 9.497469 IPR001810
MobiDBLite mobidb-lite consensus disorder prediction 429 447 - -
MobiDBLite mobidb-lite consensus disorder prediction 270 301 - -
MobiDBLite mobidb-lite consensus disorder prediction 398 417 - -
MobiDBLite mobidb-lite consensus disorder prediction 270 353 - -
MobiDBLite mobidb-lite consensus disorder prediction 429 478 - -
MobiDBLite mobidb-lite consensus disorder prediction 302 329 - -
MobiDBLite mobidb-lite consensus disorder prediction 461 478 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051213837.1 uncharacterized protein LOC127331698 [Lolium perenne] 0
TrEMBL A0A3B6C0T7 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 12 AH05.1153, AH07.1109, AH07.694, AH08.586, AH08.591, AH08.592 ...
AH08.593, AH08.594, BH07.824, BH08.639, CH05.1355, CH08.730
Poaceae Eleusine coracana subsp. coracana 11 gene-QOZ80_8AG0620710, gene-QOZ80_8AG0620730 ...
gene-QOZ80_8AG0620740, gene-QOZ80_8AG0620780, gene-QOZ80_8AG0620800, gene-QOZ80_8AG0620870, gene-QOZ80_8BG0652330, gene-QOZ80_8BG0652400, gene-QOZ80_8BG0652420, gene-QOZ80_8BG0652480, gene-QOZ80_9AG0685400
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.1HG0038960.1, HORVU.MOREX.r3.1HG0038990.1 ...
HORVU.MOREX.r3.1HG0038980.1.CDS1, HORVU.MOREX.r3.2HG0213510.1, HORVU.MOREX.r3.5HG0534780.1, HORVU.MOREX.r3.7HG0648190.1, HORVU.MOREX.r3.7HG0649320.1, HORVU.MOREX.r3.7HG0701270.1
Poaceae Lolium multiflorum 16 gene-QYE76_008238, gene-QYE76_032254, gene-QYE76_032481 ...
gene-QYE76_038981, gene-QYE76_038983, gene-QYE76_038986, gene-QYE76_038987, gene-QYE76_040192, gene-QYE76_040193, gene-QYE76_040331, gene-QYE76_040547, gene-QYE76_040550, gene-QYE76_040551, gene-QYE76_040553, gene-QYE76_067650, gene-QYE76_067653
Poaceae Oryza coarctata 9 Oco15G003840, Oco15G003850, Oco15G005330, Oco16G003710 ...
Oco16G003720, Oco16G003730, Oco16G003740, Oco16G005080, Oco16G007060
Poaceae Oryza sativa 13 LOC_Os02g09580.1, LOC_Os08g09710.1, LOC_Os08g09715.1 ...
LOC_Os08g09720.1, LOC_Os08g09730.1, LOC_Os08g09740.1, LOC_Os08g09750.1, LOC_Os08g09760.1, LOC_Os08g09780.1, LOC_Os08g09790.1, LOC_Os08g09910.1, LOC_Os08g09920.1, LOC_Os08g16860.1
Poaceae Paspalum vaginatum 4 gene-BS78_07G078200, gene-BS78_07G078300 ...
gene-BS78_07G078400, gene-BS78_07G078600
Poaceae Puccinellia tenuiflora 10 Pt_Chr0205856, Pt_Chr0304499, Pt_Chr0304500, Pt_Chr0304577 ...
Pt_Chr0502200, Pt_Chr0504563, Pt_Chr0700135, Pt_Chr0700139, Pt_Chr0704764, Pt_Chr0704894
Poaceae Sporobolus alterniflorus 10 Chr20G010380, Chr20G010390, Chr20G010400, Chr20G010410 ...
Chr20G010420, Chr29G009990, Chr29G010000, Chr29G010010, Chr29G010020, Chr29G010030
Poaceae Thinopyrum elongatum 10 Tel2E01G257500, Tel2E01G257800, Tel2E01G976600 ...
Tel2E01G976800, Tel5E01G013500, Tel5E01G853000, Tel5E01G856600, Tel7E01G177300, Tel7E01G189500, Tel7E01G647600
Poaceae Triticum dicoccoides 23 gene_TRIDC2AG014810, gene_TRIDC2AG014820 ...
gene_TRIDC2AG014830, gene_TRIDC2AG014850, gene_TRIDC2AG014870, gene_TRIDC2AG015020, gene_TRIDC2AG015030, gene_TRIDC2AG025260, gene_TRIDC2AG078790, gene_TRIDC2BG017850, gene_TRIDC2BG017870, gene_TRIDC2BG017890, gene_TRIDC2BG017910, gene_TRIDC2BG017920, gene_TRIDC2BG018010, gene_TRIDC2BG086990, gene_TRIDC3AG074950, gene_TRIDC4AG049810, gene_TRIDC4AG058130, gene_TRIDC4AG059410, gene_TRIDC7AG010440, gene_TRIDC7AG042620, gene_TRIDC7BG033780
Poaceae Triticum aestivum 51 TraesCS2A02G121400.1, TraesCS2A02G121500.1 ...
TraesCS2A02G121600.1, TraesCS2A02G121700.1, TraesCS2A02G196300.1, TraesCS2B02G142100.1, TraesCS2B02G142200.1, TraesCS2B02G142400.1, TraesCS2B02G142500.1, TraesCS2B02G142800.1, TraesCS2B02G142900.1, TraesCS2B02G143100.1, TraesCS2B02G143200.1, TraesCS2B02G598900.1, TraesCS2B02G599100.1, TraesCS2B02G599200.1, TraesCS2D02G123500.1, TraesCS2D02G123600.1, TraesCS2D02G124100.1, TraesCS2D02G124200.1, TraesCS2D02G593600.1, TraesCS2D02G593800.1, TraesCS3B02G598300.1, TraesCS3B02G599000.1, TraesCS4A02G329700.1, TraesCS4A02G329900.1, TraesCS4A02G390700.1, TraesCS4B02G025000.1, TraesCS4B02G025100.2, TraesCS5A02G005000.1, TraesCS5A02G005700.1, TraesCS5D02G006900.1, TraesCS5D02G011700.1, TraesCS5D02G543200.1, TraesCS7A02G090800.1, TraesCS7B02G205700.1, TraesCS7B02G284600.1, TraesCS7D02G079300.1, TraesCS7D02G086100.1, TraesCS7D02G302100.1, TraesCS7D02G378600.1, TraesCSU02G037100.1, TraesCSU02G037300.1, TraesCSU02G037400.1, TraesCSU02G163000.1.cds1, TraesCSU02G163100.2, TraesCSU02G174600.1, TraesCSU02G180300.1, TraesCSU02G180700.1, TraesCSU02G192600.1, TraesCSU02G248900.1.cds1
Poaceae Zea mays 1 Zm00001eb171210_P002
Poaceae Zoysia japonica 5 nbis-gene-23586, nbis-gene-23587, nbis-gene-48563 ...
nbis-gene-51333, nbis-gene-51334
Poaceae Zoysia macrostachya 2 Zma_g22619, Zma_g26540
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.