HalophFGD

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Basic Information
Locus ID: gene-QYE76_038921
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: Serine threonine-protein phosphatase 4 regulatory subunit
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 29422704 29427904 - gene-QYE76_038921
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.79 59,514.13 Da 47.08 89.30 -0.29
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 137 175 1.6E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 135 176 4.84E-5 IPR036047
SUPERFAMILY SSF50729 PH domain-like 25 92 2.89E-7 -
Gene3D G3DSA:2.30.29.30 - 21 129 3.3E-14 IPR011993
SMART SM00256 fbox_2 142 183 3.5E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K17491 (protein phosphatase 4 regulatory subunit 3)
Pathway:
ko04212 (Longevity regulating pathway - worm) map04212 (Longevity regulating pathway - worm)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06670.1 binding. 0
RefSeq XP_044430919.1 uncharacterized protein LOC123156798 isoform X2 [Triticum aestivum] 0
TrEMBL A0A3B6SI11 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 54 AH02.2144, AH02.2145, AH02.2146, AH02.2612, AH02.2620 ...
AH04.866, AH04.867, AH04.868, AH05.1334, AH05.1335, AH05.1343, AH05.1344, AH05.1349, AH05.2587, AH05.2588, AH07.1962, AH08.1677, AH08.855, AH09.622, BH01.2799, BH02.2219, BH02.2220, BH02.2707, BH04.1362, BH04.830, BH04.834, BH05.1507, BH05.1509, BH05.1514, BH05.1516, BH05.1517, BH05.1518, BH05.1522, BH05.1523, BH07.1548, BH08.1733, CH01.2151, CH02.2060, CH02.2372, CH03.4619, CH04.1669, CH04.842, CH05.1706, CH05.1708, CH05.1714, CH05.1715, CH05.1716, CH05.1717, CH05.1721, CH05.1722, CH06.2911, CH07.1310, CH08.1868, Contig328.18
Poaceae Eleusine coracana subsp. coracana 24 gene-QOZ80_1AG0021880, gene-QOZ80_1AG0022110 ...
gene-QOZ80_1AG0022120, gene-QOZ80_1AG0022170, gene-QOZ80_1AG0022180, gene-QOZ80_1BG0071840, gene-QOZ80_1BG0072280, gene-QOZ80_1BG0072290, gene-QOZ80_1BG0072300, gene-QOZ80_2AG0111150, gene-QOZ80_2AG0111160, gene-QOZ80_2AG0111190, gene-QOZ80_2AG0111200, gene-QOZ80_2AG0111220, gene-QOZ80_2AG0111230, gene-QOZ80_2BG0164470, gene-QOZ80_2BG0164480, gene-QOZ80_2BG0164570, gene-QOZ80_2BG0164660, gene-QOZ80_2BG0164720, gene-QOZ80_2BG0164730, gene-QOZ80_2BG0164740, gene-QOZ80_6AG0549200, gene-QOZ80_6BG0502750
Poaceae Hordeum vulgare 10 HORVU.MOREX.r3.3HG0267570.1.CDS1 ...
HORVU.MOREX.r3.3HG0277250.1.CDS1, HORVU.MOREX.r3.4HG0336510.1.CDS1, HORVU.MOREX.r3.5HG0421140.1.CDS1, HORVU.MOREX.r3.5HG0421160.1.CDS1, HORVU.MOREX.r3.5HG0421170.1.CDS1, HORVU.MOREX.r3.5HG0421200.1.CDS1, HORVU.MOREX.r3.5HG0424770.1.CDS1, HORVU.MOREX.r3.5HG0424800.1.CDS1, HORVU.MOREX.r3.5HG0424810.1.CDS1
Poaceae Lolium multiflorum 9 gene-QYE76_001037, gene-QYE76_018248, gene-QYE76_038921 ...
gene-QYE76_040249, gene-QYE76_054338, gene-QYE76_054447, gene-QYE76_054448, gene-QYE76_060452, gene-QYE76_060453
Poaceae Oryza coarctata 37 Oco01G011490, Oco01G013360, Oco01G013370, Oco01G016350 ...
Oco01G016960, Oco01G021620, Oco02G013520, Oco02G017180, Oco02G022200, Oco02G022220, Oco03G008820, Oco04G009130, Oco04G009140, Oco04G009150, Oco04G009160, Oco08G003970, Oco09G012500, Oco09G015350, Oco09G015370, Oco09G015380, Oco09G017150, Oco09G017170, Oco09G017220, Oco09G017230, Oco09G017240, Oco09G017250, Oco09G017510, Oco10G012580, Oco10G012590, Oco10G015260, Oco10G015270, Oco10G017360, Oco13G002050, Oco14G002140, Oco22G008680, Oco23G005470, Oco24G005120
Poaceae Oryza sativa 39 LOC_Os01g19280.1, LOC_Os01g33650.1, LOC_Os01g40240.1 ...
LOC_Os01g47130.1, LOC_Os01g48250.1, LOC_Os01g56710.1, LOC_Os01g56740.1, LOC_Os01g56750.1, LOC_Os02g21220.1, LOC_Os02g21230.1, LOC_Os02g21310.1, LOC_Os02g54330.1, LOC_Os05g40430.1, LOC_Os05g40450.1, LOC_Os05g40500.1, LOC_Os05g40510.1, LOC_Os05g40520.1, LOC_Os05g40550.1, LOC_Os05g40570.1, LOC_Os05g40580.1, LOC_Os05g40590.1, LOC_Os05g40610.1, LOC_Os05g40620.1, LOC_Os05g46050.1, LOC_Os05g46060.1, LOC_Os05g46150.1, LOC_Os05g46160.1, LOC_Os05g46170.1, LOC_Os05g46180.1, LOC_Os05g46190.1, LOC_Os05g49490.1, LOC_Os05g49500.1, LOC_Os05g49510.1, LOC_Os05g50020.1, LOC_Os08g27690.1, LOC_Os12g23450.1, LOC_Os12g23460.1, LOC_Os12g23514.1, LOC_Os12g23670.1
Poaceae Paspalum vaginatum 15 gene-BS78_01G196100, gene-BS78_02G166400, gene-BS78_K112000 ...
gene-BS78_03G175100, gene-BS78_03G219400, gene-BS78_04G168500, gene-BS78_05G118300, gene-BS78_05G120500, gene-BS78_05G120800, gene-BS78_06G116900, gene-BS78_09G133600, gene-BS78_09G172800, gene-BS78_09G243800, gene-BS78_09G243900, gene-BS78_K156300
Poaceae Puccinellia tenuiflora 3 Pt_Chr0301124, Pt_Chr0303031, Pt_Chr0304668
Poaceae Sporobolus alterniflorus 11 Chr02G016890, Chr03G009760, Chr05G017090, Chr05G017100 ...
Chr05G017110, Chr05G017120, Chr09G001230, Chr09G001310, Chr09G001320, Chr09G001330, Chr18G008730
Poaceae Thinopyrum elongatum 5 Tel1E01G479100, Tel3E01G364200, Tel3E01G406700 ...
Tel5E01G030600, Tel5E01G031100
Poaceae Triticum dicoccoides 2 gene_TRIDC3AG035780, gene_TRIDC3BG040150
Poaceae Triticum aestivum 30 TraesCS1A02G103400.1.cds1, TraesCS1A02G103700.1.cds1 ...
TraesCS1A02G103800.1.cds1, TraesCS1B02G305300.2, TraesCS1D02G295700.1, TraesCS2D02G218900.1.cds1, TraesCS3A02G209600.1.cds1, TraesCS3A02G239400.1.cds1, TraesCS3B02G239600.1.cds1, TraesCS3B02G268000.1.cds1, TraesCS3D02G212500.1.cds1, TraesCS3D02G239700.1.cds1, TraesCS4D02G039800.1.cds1, TraesCS5A02G013800.1.cds1, TraesCS5A02G014000.1.cds1, TraesCS5A02G381900.1, TraesCS5B02G011500.1.cds1, TraesCS5B02G011600.1.cds1, TraesCS5B02G011900.1.cds1, TraesCS5B02G012700.1, TraesCS5B02G012800.1.cds1, TraesCS5B02G385100.1.cds1, TraesCS5D02G019000.1, TraesCS5D02G019200.1, TraesCS5D02G019300.1, TraesCS5D02G019500.1.cds1, TraesCS6A02G276500.1.cds1, TraesCS6B02G194800.1.cds1, TraesCS6D02G156000.1.cds1, TraesCSU02G210700.1
Poaceae Zea mays 10 Zm00001eb167860_P001, Zm00001eb167880_P001 ...
Zm00001eb167900_P001, Zm00001eb236630_P001, Zm00001eb290000_P001, Zm00001eb290010_P001, Zm00001eb290020_P001, Zm00001eb290060_P001, Zm00001eb290070_P001, Zm00001eb290090_P001
Poaceae Zoysia japonica 4 nbis-gene-29398, nbis-gene-34023, nbis-gene-34025 ...
nbis-gene-45262
Poaceae Zoysia macrostachya 2 Zma_g15275, Zma_g8125
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