Basic Information
Locus ID:
gene-QYE76_038862
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 28162545 | 28165261 | + | gene-QYE76_038862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 73,353.40 Da | 39.39 | 76.93 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 527 | 557 | 0.0015 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 15 | 302 | 1.01E-13 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 206 | 667 | 1.56E-27 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 458 | 580 | 3.9E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 13 | 305 | 6.4E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 196 | 238 | 0.85 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1 | 38 | 130.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 474 | 514 | 0.093 | IPR001680 |
| SMART | SM00320 | WD40_4 | 517 | 558 | 0.015 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 603 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.1 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_051210897.1 | autophagy-related protein 18a-like [Lolium perenne] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IPQ7 | Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology