Basic Information
Locus ID:
gene-QYE76_038861
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 28158411 | 28159886 | + | gene-QYE76_038861 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 41,621.58 Da | 41.65 | 73.75 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 248 | 275 | 2.6E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 23 | 282 | 2.49E-22 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 4 | 280 | 1.6E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 235 | 276 | 0.021 | IPR001680 |
| SMART | SM00320 | WD40_4 | 193 | 232 | 0.14 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.1 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_051210895.1 | autophagy-related protein 18d-like [Lolium perenne] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6WGX9 | WD_REPEATS_REGION domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology