Basic Information
Locus ID:
gene-QYE76_038466
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17500485 | 17502095 | + | gene-QYE76_038466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 57,671.21 Da | 59.11 | 89.18 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 50 | 6.8E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 191 | 424 | 2.94E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 54 | 2.09E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 51 | 8.1E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 460 | 5.6E-10 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 259 | 284 | 1.7E-4 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 60 | 9.974368 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 149 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 0 |
| RefSeq | XP_020194265.1 | F-box protein At4g22280-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9M3B7 | Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana OX=3702 GN=At3g49150 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6D6A2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_038460, gene-QYE76_038462, gene-QYE76_038463 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G010370 |