Basic Information
Locus ID:
gene-QYE76_038462
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17442862 | 17444445 | + | gene-QYE76_038462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 59,173.01 Da | 62.91 | 91.23 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 50 | 3.5E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 214 | 438 | 6.67E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 54 | 2.49E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 51 | 2.8E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 332 | 2.2E-7 | IPR032675 |
| SMART | SM00256 | fbox_2 | 18 | 58 | 0.0079 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 282 | 307 | 2.9E-5 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 60 | 10.424773 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 0 |
| RefSeq | XP_020194265.1 | F-box protein At4g22280-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9M3B7 | Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana OX=3702 GN=At3g49150 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6D6A2 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_038460, gene-QYE76_038462, gene-QYE76_038463 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G010370 |